Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf111Q99ML9 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm8099-201ENSMUST00000200510 742 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm18062-201ENSMUST00000208020 547 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm18055-201ENSMUST00000208254 547 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf111Q99ML9 Gm37513-201ENSMUST00000194830 2268 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm38378-201ENSMUST00000195153 2268 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm37542-201ENSMUST00000192563 2832 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm11425-201ENSMUST00000119608 498 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf111Q99ML9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm27731-201ENSMUST00000185192 107 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm9396-201ENSMUST00000076703 567 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rnf111Q99ML9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gm18227-201ENSMUST00000211082 1468 ntBASIC12□□□□□ -0.49
Rnf111Q99ML9 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf111Q99ML9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms