Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Nkx6-1Q99MA9 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Nkx6-1Q99MA9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Mir7686-201ENSMUST00000200604 57 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Gm807-202ENSMUST00000224929 408 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Nkx6-1Q99MA9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm8492-201ENSMUST00000182375 987 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm10774-201ENSMUST00000188689 204 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Thoc7-209ENSMUST00000225325 765 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nkx6-1Q99MA9 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms