Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm13296-201ENSMUST00000117854 997 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm12208-201ENSMUST00000122004 163 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.88□□□□□ -0.67
Scrt1Q99M85 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scrt1Q99M85 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Scrt1Q99M85 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.87□□□□□ -0.67
Scrt1Q99M85 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms