Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm43438-201ENSMUST00000198133 379 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chmp1b1Q99LU0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Gm9200-201ENSMUST00000118513 1354 ntBASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chmp1b1Q99LU0 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chmp1b1Q99LU0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Chmp1b1Q99LU0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms