Protein–RNA interactions for Protein: Q99L02

Pagr1a, PAXIP1-associated glutamate-rich protein 1A, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pagr1aQ99L02 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pagr1aQ99L02 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Gm14665-201ENSMUST00000122294 557 ntBASIC14.32□□□□□ -0.12
Pagr1aQ99L02 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Mir7677-201ENSMUST00000184226 67 ntBASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.32□□□□□ -0.12
Pagr1aQ99L02 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.31□□□□□ -0.12
Pagr1aQ99L02 AC135469.1-201ENSMUST00000225984 772 ntBASIC14.31□□□□□ -0.12
Pagr1aQ99L02 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pagr1aQ99L02 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pagr1aQ99L02 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms