Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Smarcd2Q99JR8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm26286-201ENSMUST00000104166 134 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm10288-201ENSMUST00000084614 537 ntBASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd2Q99JR8 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm11509-201ENSMUST00000117358 325 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm13888-201ENSMUST00000119148 422 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Mir6546-201ENSMUST00000184460 62 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm10774-201ENSMUST00000188689 204 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd2Q99JR8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms