Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 Gm5051-201ENSMUST00000204085 485 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Gm8712-201ENSMUST00000221090 701 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.32□□□□□ -0.12
Smc1bQ920F6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smc1bQ920F6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm44545-201ENSMUST00000208262 746 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.31□□□□□ -0.12
Smc1bQ920F6 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smc1bQ920F6 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Matn2-203ENSMUST00000226766 3252 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm12058-201ENSMUST00000118614 437 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm14665-201ENSMUST00000122294 557 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gm45770-201ENSMUST00000212105 616 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.3□□□□□ -0.12
Smc1bQ920F6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smc1bQ920F6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 430.5 ms