Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Cts7-204ENSMUST00000225321 1257 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb11Q91UZ8 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Gm2991-201ENSMUST00000173338 480 ntBASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Gm45865-201ENSMUST00000211815 945 ntBASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb11Q91UZ8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm11222-201ENSMUST00000119005 738 ntBASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm24845-201ENSMUST00000158034 109 ntBASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.67□□□□□ -0.38
Pcdhb11Q91UZ8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 671.7 ms