Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nup35Q8R4R6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm16215-201ENSMUST00000161990 637 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm2495-201ENSMUST00000191160 466 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.07□□□□□ -0.8
Nup35Q8R4R6 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Nup35Q8R4R6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms