Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gm6983-201ENSMUST00000214912 628 ntBASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Slf1Q8R3P9 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Gm44397-201ENSMUST00000195950 113 ntBASIC12.49□□□□□ -0.41
Slf1Q8R3P9 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Gm45668-201ENSMUST00000211271 493 ntBASIC12.49□□□□□ -0.41
Slf1Q8R3P9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slf1Q8R3P9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slf1Q8R3P9 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms