Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ushbp1Q8R370 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm8018-201ENSMUST00000173536 789 ntBASIC13.88□□□□□ -0.19
Ushbp1Q8R370 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm9022-201ENSMUST00000182482 992 ntBASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.88□□□□□ -0.19
Ushbp1Q8R370 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ushbp1Q8R370 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm11597-201ENSMUST00000121423 964 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm26956-201ENSMUST00000182176 986 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm27390-201ENSMUST00000184516 176 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ushbp1Q8R370 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ushbp1Q8R370 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms