Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfc3Q8R323 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfc3Q8R323 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfc3Q8R323 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfc3Q8R323 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.5□□□□□ -0.57
Rfc3Q8R323 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Rfc3Q8R323 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Map1b-203ENSMUST00000223725 2669 ntBASIC11.49□□□□□ -0.57
Rfc3Q8R323 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm25214-201ENSMUST00000104573 129 ntBASIC11.49□□□□□ -0.57
Rfc3Q8R323 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm13492-201ENSMUST00000119772 665 ntBASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Gm31256-201ENSMUST00000194705 506 ntBASIC11.49□□□□□ -0.57
Rfc3Q8R323 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rfc3Q8R323 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rfc3Q8R323 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm23270-201ENSMUST00000104055 131 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm15236-201ENSMUST00000117309 379 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm11222-201ENSMUST00000119005 738 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rfc3Q8R323 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms