Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp7Q8R1T1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Gm19459-201ENSMUST00000176240 835 ntBASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.79■□□□□ 0.12
Chmp7Q8R1T1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Gm23085-201ENSMUST00000157849 293 ntBASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Gm5733-201ENSMUST00000190232 939 ntBASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Gm6905-201ENSMUST00000205729 511 ntBASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chmp7Q8R1T1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm24891-201ENSMUST00000104391 136 ntBASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm8343-201ENSMUST00000182705 994 ntBASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm18711-201ENSMUST00000199341 750 ntBASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Gm4607-201ENSMUST00000206649 577 ntBASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chmp7Q8R1T1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chmp7Q8R1T1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms