Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gm26956-201ENSMUST00000182176 986 ntBASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gm9368-201ENSMUST00000219348 831 ntBASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gm9899-201ENSMUST00000065519 555 ntBASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.84□□□□□ -0.35
Prpf39Q8K2Z2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Prpf39Q8K2Z2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm11222-201ENSMUST00000119005 738 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Prpf39Q8K2Z2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm2991-201ENSMUST00000173338 480 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm27516-201ENSMUST00000184237 98 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Gm30285-201ENSMUST00000214614 422 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Prpf39Q8K2Z2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms