Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rtn1Q8K0T0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Gm28882-201ENSMUST00000185504 314 ntBASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.31□□□□□ -0.12
Rtn1Q8K0T0 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Gm14832-201ENSMUST00000121289 322 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Gm38266-201ENSMUST00000194931 421 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Gm45331-201ENSMUST00000209868 554 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rtn1Q8K0T0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm15198-201ENSMUST00000117283 177 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm11222-201ENSMUST00000119005 738 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm45865-201ENSMUST00000211815 945 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtn1Q8K0T0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms