Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gm26110-201ENSMUST00000083971 165 ntBASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps53Q8CCB4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm14017-201ENSMUST00000121934 386 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm30285-201ENSMUST00000214614 422 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps53Q8CCB4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm13316-201ENSMUST00000140537 691 ntBASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm8099-201ENSMUST00000200510 742 ntBASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps53Q8CCB4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps53Q8CCB4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.4□□□□□ -0.1
Vps53Q8CCB4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms