Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Uba3Q8C878 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba3Q8C878 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm13350-201ENSMUST00000120519 479 ntBASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.01□□□□□ -0.33
Uba3Q8C878 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.01□□□□□ -0.33
Uba3Q8C878 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.01□□□□□ -0.33
Uba3Q8C878 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba3Q8C878 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Uba3Q8C878 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13□□□□□ -0.33
Uba3Q8C878 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gm15547-201ENSMUST00000122152 333 ntBASIC13□□□□□ -0.33
Uba3Q8C878 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gm7172-201ENSMUST00000218047 1152 ntBASIC13□□□□□ -0.33
Uba3Q8C878 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 AC126253.1-202ENSMUST00000226732 835 ntBASIC13□□□□□ -0.33
Uba3Q8C878 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Uba3Q8C878 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Uba3Q8C878 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Uba3Q8C878 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Uba3Q8C878 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Uba3Q8C878 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Uba3Q8C878 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Uba3Q8C878 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms