Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Tsen54Q8C2A2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm15371-201ENSMUST00000117057 784 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm12490-201ENSMUST00000120255 560 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm11918-201ENSMUST00000121660 179 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm27701-201ENSMUST00000184498 110 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm9908-201ENSMUST00000211534 448 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Tsen54Q8C2A2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tsen54Q8C2A2 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms