Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf3Q8C120 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.91□□□□□ -0.34
Sh3rf3Q8C120 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf3Q8C120 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sh3rf3Q8C120 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm12742-201ENSMUST00000117326 410 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm43118-201ENSMUST00000199149 775 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sh3rf3Q8C120 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Sh3rf3Q8C120 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Sh3rf3Q8C120 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Sh3rf3Q8C120 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sh3rf3Q8C120 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm4986-201ENSMUST00000119731 549 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm11793-201ENSMUST00000120433 981 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm13342-201ENSMUST00000121055 207 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm18304-201ENSMUST00000189162 546 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm45930-201ENSMUST00000221330 292 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sh3rf3Q8C120 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh3rf3Q8C120 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms