Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rd3Q8BRE0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm24934-201ENSMUST00000103764 111 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm44958-201ENSMUST00000203734 736 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm29787-201ENSMUST00000222129 849 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Rd3Q8BRE0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Gm13461-201ENSMUST00000120980 662 ntBASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Gm9555-201ENSMUST00000200908 583 ntBASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Rd3Q8BRE0 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm5616-201ENSMUST00000165252 384 ntBASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm8741-201ENSMUST00000174736 384 ntBASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rd3Q8BRE0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms