Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm32025-201ENSMUST00000217960 307 ntBASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc40Q8BI79 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm12390-201ENSMUST00000117897 397 ntBASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm10268-201ENSMUST00000085340 555 ntBASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc40Q8BI79 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm16177-201ENSMUST00000120728 718 ntBASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm8602-201ENSMUST00000184045 607 ntBASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc40Q8BI79 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.96□□□□□ -0.33
Ccdc40Q8BI79 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms