Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.02□□□□□ -0.33
Nod1Q8BHB0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm24231-201ENSMUST00000104315 133 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm14058-201ENSMUST00000116082 735 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Ntng1-201ENSMUST00000051253 327 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nod1Q8BHB0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nod1Q8BHB0 Mir7677-201ENSMUST00000184226 67 ntBASIC13□□□□□ -0.33
Nod1Q8BHB0 Gm7467-201ENSMUST00000185173 652 ntBASIC13□□□□□ -0.33
Nod1Q8BHB0 Gm37835-201ENSMUST00000193305 361 ntBASIC13□□□□□ -0.33
Nod1Q8BHB0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13□□□□□ -0.33
Nod1Q8BHB0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13□□□□□ -0.33
Nod1Q8BHB0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13□□□□□ -0.33
Nod1Q8BHB0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13□□□□□ -0.33
Nod1Q8BHB0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nod1Q8BHB0 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nod1Q8BHB0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Matn2-206ENSMUST00000228570 2798 ntBASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Gm15515-201ENSMUST00000117827 822 ntBASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Gm15131-201ENSMUST00000119124 595 ntBASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.99□□□□□ -0.33
Nod1Q8BHB0 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms