Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Depdc1bQ8BH88 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm13492-201ENSMUST00000119772 665 ntBASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm14760-201ENSMUST00000121831 999 ntBASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm38241-201ENSMUST00000192641 898 ntBASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm6621-201ENSMUST00000193251 772 ntBASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Depdc1bQ8BH88 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Depdc1bQ8BH88 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm14381-201ENSMUST00000122105 414 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Rmrp-201ENSMUST00000157463 271 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm27320-201ENSMUST00000184892 109 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm37259-201ENSMUST00000193903 849 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm21769-201ENSMUST00000211922 111 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Depdc1bQ8BH88 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Depdc1bQ8BH88 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms