Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4dQ8BGV9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4dQ8BGV9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4dQ8BGV9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4dQ8BGV9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Atg4dQ8BGV9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm15276-201ENSMUST00000145953 498 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Atg4dQ8BGV9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Gm43371-201ENSMUST00000202838 1031 ntBASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Gzmn-202ENSMUST00000225535 989 ntBASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.51□□□□□ -0.57
Atg4dQ8BGV9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Atg4dQ8BGV9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms