Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim6Q8BGE7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim6Q8BGE7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trim6Q8BGE7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trim6Q8BGE7 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.15□□□□□ -0.31
Trim6Q8BGE7 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm6211-201ENSMUST00000147973 4275 ntBASIC13.14□□□□□ -0.31
Trim6Q8BGE7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Mir6977-201ENSMUST00000184960 64 ntBASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim6Q8BGE7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm26185-201ENSMUST00000157692 266 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm27701-201ENSMUST00000184498 110 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm37922-201ENSMUST00000195596 455 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm8227-201ENSMUST00000223306 571 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim6Q8BGE7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms