Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm27341-201ENSMUST00000183570 106 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm44262-201ENSMUST00000204969 372 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Gm8712-201ENSMUST00000221090 701 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.17□□□□□ -0.78
Sox21Q811W0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sox21Q811W0 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.17□□□□□ -0.78
Sox21Q811W0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm12291-201ENSMUST00000121627 311 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm25700-201ENSMUST00000177693 110 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Sox21Q811W0 AA914427-201ENSMUST00000193194 1166 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm3786-201ENSMUST00000202659 378 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.16□□□□□ -0.78
Sox21Q811W0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sox21Q811W0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sox21Q811W0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sox21Q811W0 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Sox21Q811W0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Sox21Q811W0 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sox21Q811W0 Gm14208-201ENSMUST00000119645 678 ntBASIC10.15□□□□□ -0.78
Sox21Q811W0 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.15□□□□□ -0.78
Sox21Q811W0 Gm13492-201ENSMUST00000119772 665 ntBASIC10.15□□□□□ -0.78
Sox21Q811W0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Sox21Q811W0 Gm16296-201ENSMUST00000159905 325 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms