Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gm23363-201ENSMUST00000175024 79 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gm24694-201ENSMUST00000180054 110 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gm27663-201ENSMUST00000184839 110 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TwistnbQ78WZ7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TwistnbQ78WZ7 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm23935-201ENSMUST00000102303 57 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm24270-201ENSMUST00000102326 57 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm8805-201ENSMUST00000117848 313 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm15321-201ENSMUST00000121290 288 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm24245-201ENSMUST00000157318 57 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TwistnbQ78WZ7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms