Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc85bQ6PDY0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.93□□□□□ -0.34
Ccdc85bQ6PDY0 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc85bQ6PDY0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm23596-201ENSMUST00000104304 132 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm14585-201ENSMUST00000120713 634 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm23771-201ENSMUST00000178702 110 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm43610-201ENSMUST00000199117 365 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc85bQ6PDY0 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm11956-201ENSMUST00000119525 512 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Mir1956-201ENSMUST00000157748 65 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm5298-201ENSMUST00000201122 892 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm9111-201ENSMUST00000219394 709 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm25201-201ENSMUST00000083093 170 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc85bQ6PDY0 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc85bQ6PDY0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms