Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Scaf8Q6DID3 Gm16071-201ENSMUST00000119589 793 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm7722-201ENSMUST00000120646 741 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm17826-201ENSMUST00000189720 798 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm4157-201ENSMUST00000211647 679 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm6867-201ENSMUST00000219165 425 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.52□□□□□ -0.09
Scaf8Q6DID3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm11949-201ENSMUST00000117640 372 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm15595-201ENSMUST00000120840 961 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm19091-201ENSMUST00000208120 978 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 AC172027.1-201ENSMUST00000217659 337 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scaf8Q6DID3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf8Q6DID3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms