Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.28□□□□□ -0.12
Scn9aQ62205 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm5257-201ENSMUST00000121823 790 ntBASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm26134-201ENSMUST00000178484 110 ntBASIC14.28□□□□□ -0.12
Scn9aQ62205 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.28□□□□□ -0.12
Scn9aQ62205 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Scn9aQ62205 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.28□□□□□ -0.12
Scn9aQ62205 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Scn9aQ62205 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Scn9aQ62205 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Scn9aQ62205 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Gm5805-201ENSMUST00000072779 456 ntBASIC14.27□□□□□ -0.13
Scn9aQ62205 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Scn9aQ62205 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.27□□□□□ -0.13
Scn9aQ62205 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Scn9aQ62205 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm23912-201ENSMUST00000104687 87 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm14892-201ENSMUST00000117636 267 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm8723-201ENSMUST00000166076 820 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm8701-201ENSMUST00000169259 874 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm26989-201ENSMUST00000182608 749 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm37981-201ENSMUST00000194280 535 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm43912-201ENSMUST00000204352 538 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm2553-201ENSMUST00000215986 605 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm18968-201ENSMUST00000221319 862 ntBASIC14.26□□□□□ -0.13
Scn9aQ62205 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn9aQ62205 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn9aQ62205 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms