Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.3□□□□□ -0.6
VcanQ62059 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.3□□□□□ -0.6
VcanQ62059 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
VcanQ62059 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm23062-201ENSMUST00000102349 110 ntBASIC11.3□□□□□ -0.6
VcanQ62059 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Gm14270-201ENSMUST00000118388 846 ntBASIC11.3□□□□□ -0.6
VcanQ62059 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.3□□□□□ -0.6
VcanQ62059 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC11.3□□□□□ -0.6
VcanQ62059 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VcanQ62059 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.3□□□□□ -0.6
VcanQ62059 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.29□□□□□ -0.6
VcanQ62059 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC11.29□□□□□ -0.6
VcanQ62059 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC11.29□□□□□ -0.6
VcanQ62059 Gm9797-202ENSMUST00000218003 294 ntBASIC11.29□□□□□ -0.6
VcanQ62059 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
VcanQ62059 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
VcanQ62059 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
VcanQ62059 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
VcanQ62059 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VcanQ62059 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.29□□□□□ -0.6
VcanQ62059 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.29□□□□□ -0.6
VcanQ62059 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.29□□□□□ -0.6
VcanQ62059 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.29□□□□□ -0.6
VcanQ62059 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VcanQ62059 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gm5449-201ENSMUST00000081132 357 ntBASIC11.28□□□□□ -0.6
VcanQ62059 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Gm23612-201ENSMUST00000103823 110 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.28□□□□□ -0.6
VcanQ62059 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Gm23576-201ENSMUST00000179918 110 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Gm28833-201ENSMUST00000189671 559 ntBASIC11.28□□□□□ -0.6
VcanQ62059 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.28□□□□□ -0.6
VcanQ62059 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.28□□□□□ -0.6
VcanQ62059 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
VcanQ62059 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VcanQ62059 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms