Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.54□□□□□ -0.88
Notch3Q61982 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Notch3Q61982 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.54□□□□□ -0.88
Notch3Q61982 Gm13996-201ENSMUST00000118456 430 ntBASIC9.54□□□□□ -0.88
Notch3Q61982 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Notch3Q61982 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.54□□□□□ -0.88
Notch3Q61982 Gm8285-201ENSMUST00000208293 759 ntBASIC9.54□□□□□ -0.88
Notch3Q61982 Gm8712-201ENSMUST00000221090 701 ntBASIC9.54□□□□□ -0.88
Notch3Q61982 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Notch3Q61982 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Notch3Q61982 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.53□□□□□ -0.88
Notch3Q61982 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Notch3Q61982 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Gm18893-201ENSMUST00000198416 943 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm44405-201ENSMUST00000198952 126 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Notch3Q61982 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Notch3Q61982 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.53□□□□□ -0.88
Notch3Q61982 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.53□□□□□ -0.88
Notch3Q61982 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Gm14704-201ENSMUST00000120300 874 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Gm8913-201ENSMUST00000209491 641 ntBASIC9.53□□□□□ -0.88
Notch3Q61982 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.53□□□□□ -0.88
Notch3Q61982 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.53□□□□□ -0.88
Notch3Q61982 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Notch3Q61982 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.88
Notch3Q61982 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms