Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sim2Q61079 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.11□□□□□ -0.47
Sim2Q61079 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sim2Q61079 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sim2Q61079 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Sim2Q61079 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Sim2Q61079 Mir1901-201ENSMUST00000122616 78 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Gm22138-201ENSMUST00000158748 128 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Gm2965-201ENSMUST00000198365 343 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Gm17889-201ENSMUST00000198410 598 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Snora73b-201ENSMUST00000083419 205 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.1□□□□□ -0.47
Sim2Q61079 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sim2Q61079 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sim2Q61079 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.09□□□□□ -0.47
Sim2Q61079 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm14585-201ENSMUST00000120713 634 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Mir6998-201ENSMUST00000183343 64 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 Mir7076-201ENSMUST00000183519 74 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm3793-201ENSMUST00000204973 672 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sim2Q61079 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 Gm5455-201ENSMUST00000058710 715 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.09□□□□□ -0.47
Sim2Q61079 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Sim2Q61079 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sim2Q61079 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.09□□□□□ -0.47
Sim2Q61079 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms