Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mir6953-201ENSMUST00000184745 68 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Gm26670-202ENSMUST00000226862 340 ntBASIC11.9□□□□□ -0.5
Col12a1Q60847 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col12a1Q60847 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col12a1Q60847 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm13445-201ENSMUST00000121664 307 ntBASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.89□□□□□ -0.51
Col12a1Q60847 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.89□□□□□ -0.51
Col12a1Q60847 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.89□□□□□ -0.51
Col12a1Q60847 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.89□□□□□ -0.51
Col12a1Q60847 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.89□□□□□ -0.51
Col12a1Q60847 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col12a1Q60847 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Col12a1Q60847 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm23612-201ENSMUST00000103823 110 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm15207-201ENSMUST00000119259 442 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm23576-201ENSMUST00000179918 110 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm12684-201ENSMUST00000118675 999 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm16459-201ENSMUST00000121443 686 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm5449-201ENSMUST00000081132 357 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col12a1Q60847 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.88□□□□□ -0.51
Col12a1Q60847 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col12a1Q60847 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms