Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm15770-201ENSMUST00000117498 584 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 AW822252-206ENSMUST00000208904 237 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Mir497b-201ENSMUST00000093601 125 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trav3-3Q5R1C3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm43143-201ENSMUST00000196083 2023 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm12428-201ENSMUST00000119844 727 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm14767-201ENSMUST00000121559 586 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Mir1897-201ENSMUST00000122581 272 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav3-3Q5R1C3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms