Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim80Q3V061 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 Gm38223-201ENSMUST00000194484 695 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.84□□□□□ -0.35
Trim80Q3V061 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trim80Q3V061 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim80Q3V061 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trim80Q3V061 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim80Q3V061 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm29608-201ENSMUST00000190444 463 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm9257-201ENSMUST00000221254 232 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim80Q3V061 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.83□□□□□ -0.36
Trim80Q3V061 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim80Q3V061 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim80Q3V061 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms