Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm24934-201ENSMUST00000103764 111 ntBASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nlrc4Q3UP24 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm14109-201ENSMUST00000118814 309 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm27320-201ENSMUST00000184892 109 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nlrc4Q3UP24 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Paupar-201ENSMUST00000194826 3482 ntBASIC13.02□□□□□ -0.32
Nlrc4Q3UP24 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Gm27046-201ENSMUST00000182160 463 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 AA914427-201ENSMUST00000193194 1166 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Gm6082-201ENSMUST00000215204 454 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Gm19994-201ENSMUST00000217086 586 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.02□□□□□ -0.33
Nlrc4Q3UP24 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms