Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Gm23363-201ENSMUST00000175024 79 ntBASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc4Q3TCX3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm25214-201ENSMUST00000104573 129 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm13492-201ENSMUST00000119772 665 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm13875-201ENSMUST00000120162 282 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm15276-201ENSMUST00000145953 498 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm13097-201ENSMUST00000210722 397 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Daam2-202ENSMUST00000224595 1926 ntBASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Khdc4Q3TCX3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Paupar-201ENSMUST00000194826 3482 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.79□□□□□ -0.52
Khdc4Q3TCX3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms