Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.88□□□□□ -0.51
Hoxc4Q08624 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.88□□□□□ -0.51
Hoxc4Q08624 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.88□□□□□ -0.51
Hoxc4Q08624 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Hoxc4Q08624 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm12164-201ENSMUST00000121695 551 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm43184-201ENSMUST00000197247 542 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm4157-201ENSMUST00000211647 679 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hoxc4Q08624 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.87□□□□□ -0.51
Hoxc4Q08624 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm11450-201ENSMUST00000121144 333 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 B9d1os-201ENSMUST00000137010 674 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 Gm43378-201ENSMUST00000199336 582 ntBASIC11.86□□□□□ -0.51
Hoxc4Q08624 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms