Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ebf1Q07802 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ebf1Q07802 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.57□□□□□ -0.4
Ebf1Q07802 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Gm5070-201ENSMUST00000177599 862 ntBASIC12.57□□□□□ -0.4
Ebf1Q07802 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Gm37835-201ENSMUST00000193305 361 ntBASIC12.57□□□□□ -0.4
Ebf1Q07802 Gm45224-201ENSMUST00000208203 414 ntBASIC12.57□□□□□ -0.4
Ebf1Q07802 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.57□□□□□ -0.4
Ebf1Q07802 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ebf1Q07802 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.57□□□□□ -0.4
Ebf1Q07802 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ebf1Q07802 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm14832-201ENSMUST00000121289 322 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm24749-201ENSMUST00000157838 343 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm9550-201ENSMUST00000161130 862 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm7003-201ENSMUST00000195089 312 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm18730-201ENSMUST00000218038 343 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.56□□□□□ -0.4
Ebf1Q07802 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Ebf1Q07802 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ebf1Q07802 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Ebf1Q07802 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ebf1Q07802 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms