Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.14□□□□□ -0.47
Atf4Q06507 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm11222-201ENSMUST00000119005 738 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm11964-201ENSMUST00000120982 444 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm13460-201ENSMUST00000121274 353 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm2231-201ENSMUST00000125661 612 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Atf4Q06507 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.14□□□□□ -0.47
Atf4Q06507 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 1700083H02Rik-201ENSMUST00000190526 637 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm37986-201ENSMUST00000193285 383 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm42591-201ENSMUST00000197249 700 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm19253-201ENSMUST00000204279 307 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm44636-201ENSMUST00000206130 755 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Atf4Q06507 AC140368.1-202ENSMUST00000226131 658 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 CT025523.1-201ENSMUST00000228318 694 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf4Q06507 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.14□□□□□ -0.47
Atf4Q06507 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Atf4Q06507 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.14□□□□□ -0.47
Atf4Q06507 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf4Q06507 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.13□□□□□ -0.47
Atf4Q06507 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm14908-201ENSMUST00000120930 1286 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.13□□□□□ -0.47
Atf4Q06507 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Gm18985-201ENSMUST00000196472 1079 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm42732-201ENSMUST00000202887 1197 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm45401-201ENSMUST00000209456 733 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC12.13□□□□□ -0.47
Atf4Q06507 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Atf4Q06507 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 AC154527.3-201ENSMUST00000225519 989 ntBASIC12.13□□□□□ -0.47
Atf4Q06507 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Atf4Q06507 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Atf4Q06507 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms