Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm27501-201ENSMUST00000183599 107 ntBASIC10.88□□□□□ -0.67
Thbs3Q05895 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.88□□□□□ -0.67
Thbs3Q05895 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.88□□□□□ -0.67
Thbs3Q05895 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.88□□□□□ -0.67
Thbs3Q05895 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.88□□□□□ -0.67
Thbs3Q05895 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.88□□□□□ -0.67
Thbs3Q05895 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Thbs3Q05895 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Thbs3Q05895 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Thbs3Q05895 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.88□□□□□ -0.67
Thbs3Q05895 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.88□□□□□ -0.67
Thbs3Q05895 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm26956-201ENSMUST00000182176 986 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm28882-201ENSMUST00000185504 314 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm43630-201ENSMUST00000201550 776 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm9368-201ENSMUST00000219348 831 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm8227-201ENSMUST00000223306 571 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.87□□□□□ -0.67
Thbs3Q05895 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Thbs3Q05895 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Thbs3Q05895 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.86□□□□□ -0.67
Thbs3Q05895 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.86□□□□□ -0.67
Thbs3Q05895 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Thbs3Q05895 Gm11531-201ENSMUST00000117614 555 ntBASIC10.86□□□□□ -0.67
Thbs3Q05895 Gm11222-201ENSMUST00000119005 738 ntBASIC10.86□□□□□ -0.67
Thbs3Q05895 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.86□□□□□ -0.67
Thbs3Q05895 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms