Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 Gm42550-201ENSMUST00000201553 960 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.4□□□□□ -0.74
Npas1P97459 AC139382.1-201ENSMUST00000221402 498 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Npas1P97459 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.4□□□□□ -0.74
Npas1P97459 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Npas1P97459 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Npas1P97459 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Npas1P97459 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Npas1P97459 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Npas1P97459 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.39□□□□□ -0.75
Npas1P97459 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Npas1P97459 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Gm12151-201ENSMUST00000121374 290 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.39□□□□□ -0.75
Npas1P97459 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm27390-201ENSMUST00000184516 176 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.39□□□□□ -0.75
Npas1P97459 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Npas1P97459 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Npas1P97459 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.39□□□□□ -0.75
Npas1P97459 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Npas1P97459 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.38□□□□□ -0.75
Npas1P97459 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.38□□□□□ -0.75
Npas1P97459 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Npas1P97459 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.38□□□□□ -0.75
Npas1P97459 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Npas1P97459 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms