Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.2□□□□□ -0.46
Shox2P70390 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shox2P70390 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Shox2P70390 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Shox2P70390 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shox2P70390 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shox2P70390 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.19□□□□□ -0.46
Shox2P70390 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.19□□□□□ -0.46
Shox2P70390 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Gm27618-201ENSMUST00000183671 60 ntBASIC12.19□□□□□ -0.46
Shox2P70390 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.19□□□□□ -0.46
Shox2P70390 Gm6888-201ENSMUST00000221983 706 ntBASIC12.19□□□□□ -0.46
Shox2P70390 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Shox2P70390 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Shox2P70390 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shox2P70390 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shox2P70390 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.18□□□□□ -0.46
Shox2P70390 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.18□□□□□ -0.46
Shox2P70390 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Shox2P70390 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.18□□□□□ -0.46
Shox2P70390 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Shox2P70390 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms