Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Rpl39P62892 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Gm14921-201ENSMUST00000118643 908 ntBASIC8.8□□□□□ -1
Rpl39P62892 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Rpl39P62892 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC8.8□□□□□ -1
Rpl39P62892 Gm10371-202ENSMUST00000228010 1081 ntBASIC8.8□□□□□ -1
Rpl39P62892 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Rpl39P62892 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39P62892 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.79□□□□□ -1
Rpl39P62892 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Gm23935-201ENSMUST00000102303 57 ntBASIC8.79□□□□□ -1
Rpl39P62892 Gm24270-201ENSMUST00000102326 57 ntBASIC8.79□□□□□ -1
Rpl39P62892 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Rpl39P62892 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.79□□□□□ -1
Rpl39P62892 Gm24245-201ENSMUST00000157318 57 ntBASIC8.79□□□□□ -1
Rpl39P62892 Gm24694-201ENSMUST00000180054 110 ntBASIC8.79□□□□□ -1
Rpl39P62892 Gm27663-201ENSMUST00000184839 110 ntBASIC8.79□□□□□ -1
Rpl39P62892 Gm37171-201ENSMUST00000192636 1185 ntBASIC8.79□□□□□ -1
Rpl39P62892 Gm43416-201ENSMUST00000201916 1015 ntBASIC8.79□□□□□ -1
Rpl39P62892 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 AC156560.2-201ENSMUST00000221232 264 ntBASIC8.79□□□□□ -1
Rpl39P62892 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rpl39P62892 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl39P62892 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39P62892 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm43172-201ENSMUST00000202139 2137 ntBASIC8.78□□□□□ -1
Rpl39P62892 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms