Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.23□□□□□ -0.13
Tpm2P58774 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Tpm2P58774 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Tpm2P58774 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.23□□□□□ -0.13
Tpm2P58774 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.23□□□□□ -0.13
Tpm2P58774 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Tpm2P58774 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.22□□□□□ -0.13
Tpm2P58774 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.22□□□□□ -0.13
Tpm2P58774 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.22□□□□□ -0.13
Tpm2P58774 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.22□□□□□ -0.13
Tpm2P58774 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.22□□□□□ -0.13
Tpm2P58774 Gm20949-201ENSMUST00000206478 952 ntBASIC14.22□□□□□ -0.13
Tpm2P58774 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Gm38292-201ENSMUST00000192646 3045 ntBASIC14.22□□□□□ -0.13
Tpm2P58774 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.22□□□□□ -0.13
Tpm2P58774 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Tpm2P58774 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Tpm2P58774 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.21□□□□□ -0.13
Tpm2P58774 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tpm2P58774 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Tpm2P58774 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm6218-201ENSMUST00000219812 628 ntBASIC14.21□□□□□ -0.13
Tpm2P58774 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Tpm2P58774 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC14.21□□□□□ -0.13
Tpm2P58774 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Tpm2P58774 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tpm2P58774 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm2P58774 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm2P58774 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tpm2P58774 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Tpm2P58774 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.21□□□□□ -0.14
Tpm2P58774 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tpm2P58774 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tpm2P58774 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Tpm2P58774 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Tpm2P58774 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.2□□□□□ -0.14
Tpm2P58774 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
Tpm2P58774 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.2□□□□□ -0.14
Tpm2P58774 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tpm2P58774 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms