Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.84□□□□□ -0.51
Cdkn2bP55271 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.84□□□□□ -0.51
Cdkn2bP55271 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdkn2bP55271 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdkn2bP55271 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdkn2bP55271 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Cdkn2bP55271 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cdkn2bP55271 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.83□□□□□ -0.52
Cdkn2bP55271 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.83□□□□□ -0.52
Cdkn2bP55271 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Gm12314-201ENSMUST00000118104 538 ntBASIC11.83□□□□□ -0.52
Cdkn2bP55271 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.83□□□□□ -0.52
Cdkn2bP55271 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cdkn2bP55271 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.82□□□□□ -0.52
Cdkn2bP55271 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gm27486-201ENSMUST00000184923 80 ntBASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.82□□□□□ -0.52
Cdkn2bP55271 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdkn2bP55271 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms