Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Gm14247-201ENSMUST00000120950 237 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Gm7666-201ENSMUST00000146631 819 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Msh6P54276 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Msh6P54276 Gm19287-201ENSMUST00000203190 358 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Msh6P54276 Gm9463-201ENSMUST00000206707 601 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Msh6P54276 Gm26448-201ENSMUST00000082446 203 ntBASIC15.6■□□□□ 0.09
Msh6P54276 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Msh6P54276 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Msh6P54276 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.59■□□□□ 0.09
Msh6P54276 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.59■□□□□ 0.09
Msh6P54276 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Gm9387-201ENSMUST00000098624 1320 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Gm14724-201ENSMUST00000118400 537 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Gm8199-201ENSMUST00000121323 823 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.59■□□□□ 0.09
Msh6P54276 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.59■□□□□ 0.09
Msh6P54276 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.59■□□□□ 0.09
Msh6P54276 AC153954.1-201ENSMUST00000216959 255 ntBASIC15.59■□□□□ 0.09
Msh6P54276 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Gm807-202ENSMUST00000224929 408 ntBASIC15.59■□□□□ 0.09
Msh6P54276 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Msh6P54276 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Msh6P54276 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Msh6P54276 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Msh6P54276 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.58■□□□□ 0.09
Msh6P54276 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Msh6P54276 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.58■□□□□ 0.09
Msh6P54276 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
Msh6P54276 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Msh6P54276 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Msh6P54276 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Gm21998-201ENSMUST00000117552 1308 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Msh6P54276 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Msh6P54276 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Msh6P54276 Mup-ps26-201ENSMUST00000121751 202 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.58■□□□□ 0.08
Msh6P54276 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.58■□□□□ 0.08
Msh6P54276 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Gm6397-201ENSMUST00000161973 1069 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Gm43184-201ENSMUST00000197247 542 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Gm6905-201ENSMUST00000205729 511 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Gm45398-201ENSMUST00000210561 165 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Gm7551-201ENSMUST00000089593 1074 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.58■□□□□ 0.08
Msh6P54276 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Msh6P54276 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.57■□□□□ 0.08
Msh6P54276 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Msh6P54276 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Msh6P54276 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms