Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.32□□□□□ -0.44
Atxn1P54254 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Atxn1P54254 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Atxn1P54254 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Atxn1P54254 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.31□□□□□ -0.44
Atxn1P54254 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.31□□□□□ -0.44
Atxn1P54254 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm9358-201ENSMUST00000183067 927 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Gm37905-201ENSMUST00000195310 341 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.31□□□□□ -0.44
Atxn1P54254 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm45925-201ENSMUST00000218882 744 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.31□□□□□ -0.44
Atxn1P54254 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Atxn1P54254 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Atxn1P54254 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
Atxn1P54254 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Atxn1P54254 Gm15711-201ENSMUST00000118889 535 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Gm8492-201ENSMUST00000182375 987 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Gm27627-201ENSMUST00000183644 150 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Gm45550-201ENSMUST00000209380 946 ntBASIC12.3□□□□□ -0.44
Atxn1P54254 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Atxn1P54254 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Atxn1P54254 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.3□□□□□ -0.44
Atxn1P54254 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms