Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC18.72■□□□□ 0.59
Cux1P53564 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Gm8459-201ENSMUST00000162504 760 ntBASIC18.72■□□□□ 0.59
Cux1P53564 Gm44421-201ENSMUST00000205064 1221 ntBASIC18.72■□□□□ 0.59
Cux1P53564 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC18.72■□□□□ 0.59
Cux1P53564 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.72■□□□□ 0.59
Cux1P53564 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC18.72■□□□□ 0.59
Cux1P53564 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cux1P53564 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cux1P53564 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cux1P53564 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC18.71■□□□□ 0.59
Cux1P53564 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC18.71■□□□□ 0.59
Cux1P53564 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Cux1P53564 Olfr584-201ENSMUST00000098210 964 ntBASIC18.71■□□□□ 0.59
Cux1P53564 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Cux1P53564 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
Cux1P53564 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cux1P53564 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cux1P53564 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC18.7■□□□□ 0.58
Cux1P53564 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
Cux1P53564 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cux1P53564 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cux1P53564 Gm12990-201ENSMUST00000120372 468 ntBASIC18.7■□□□□ 0.58
Cux1P53564 Gm4879-201ENSMUST00000122190 1272 ntBASIC18.7■□□□□ 0.58
Cux1P53564 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC18.7■□□□□ 0.58
Cux1P53564 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC18.7■□□□□ 0.58
Cux1P53564 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cux1P53564 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC18.7■□□□□ 0.58
Cux1P53564 Gm2875-201ENSMUST00000211333 360 ntBASIC18.7■□□□□ 0.58
Cux1P53564 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cux1P53564 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC18.7■□□□□ 0.58
Cux1P53564 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cux1P53564 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cux1P53564 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cux1P53564 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.7■□□□□ 0.58
Cux1P53564 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC18.7■□□□□ 0.58
Cux1P53564 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC18.69■□□□□ 0.58
Cux1P53564 Gm23218-201ENSMUST00000158124 276 ntBASIC18.69■□□□□ 0.58
Cux1P53564 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gm3793-201ENSMUST00000204973 672 ntBASIC18.69■□□□□ 0.58
Cux1P53564 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC18.69■□□□□ 0.58
Cux1P53564 Prrxl1-205ENSMUST00000228878 723 ntBASIC18.69■□□□□ 0.58
Cux1P53564 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Cux1P53564 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC18.69■□□□□ 0.58
Cux1P53564 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC18.69■□□□□ 0.58
Cux1P53564 Gm23272-201ENSMUST00000104053 129 ntBASIC18.69■□□□□ 0.58
Cux1P53564 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cux1P53564 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms